Note that to use this option it is necessary to crop the image for a single bead from the ImageJ menu Image -> Crop and then drag a region around a bead. To use the EPFL PSF function, on the ImageJ menu select Plugins -> MetroloJ -> Generate PSF Report. Restart ImageJ/Fiji if it was already running for the plugin to become available.Copy PVReader.txt to the …\macros folder (required to open Prairie View data sets from the command line/actions, but otherwise optional).Copy Prairie_Reader.jar to the …\plugins\Input-Output folder.Find the folder for the ImageJ/Fiji installation if there is a shortcut right click on it and select Properties, then click the Open File Location button.To run ImageJ use the shortcut(s) created in step 2, or run the executable mentioned in step 2 directlyĬustom Installation (Add/Update Prairie Reader in existing ImageJ/Fiji installation).To create a shortcut right click on the executable and select the Create shortcut option, from there the shortcut can be renamed and moved to another location for example, the Windows Desktop If extracted to the Program Files folder in step 1 the path to the executable will be C:\Program Files\ImageJ\ImageJ.exe.
(Optional) Create one of more shortcuts to ImageJ.exe.
Note that all of the individual plugins/macros which needed to be copied manually in previous versions are now already included in the correct folders within the archive
#IMAGEJ MACRO FUNCTION ZIP FILE#
zip file accompanying this document) to C:\Program Files.Īnother location can be used if desired, for example the Windows Desktop. ImageJ/Prairie Reader Plugin Default Installation (Install ImageJ version 1.49 with Prairie Reader Plugin)
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